New Technology for PCR Product Detection Using Self-Probing Amplicons and Fluorescence Signals

2023-04-07 11:46:00 By : Mr. James Pan
PCR – Fluorescence Probing: A Breakthrough in Molecular Diagnostics

Molecular diagnostics is a rapidly growing field that involves the identification of disease-causing microorganisms and genetic mutations using DNA-based methods. These methods have revolutionized the diagnosis and management of various diseases and have become an essential tool for personalized medicine. PCR (polymerase chain reaction) is one of the most widely used techniques in molecular diagnostics. It allows amplification of a tiny piece of DNA to detectable levels and is used for a variety of applications such as detection of viruses, bacteria, genetic mutations, and forensic analysis.
Detection of PCR products using self-probing amplicons and fluorescence.  Department of Oncology


In recent years, there has been a shift towards higher throughput, closed-tube, and automated methods in molecular diagnostics. Fluorescence is the favored signaling technology for such assays due to its sensitivity and specificity. In these methods, fluorescently labeled probes hybridize to the PCR product to generate a signal that can be detected by a fluorescence detector. However, the major challenge with these techniques is the design and synthesis of specific, high-quality probes that can hybridize to the target with high efficiency and specificity.

A new technology called fluorescence probing has been developed that addresses some of these challenges. This technology uses a primer with an integral tail that is used to probe an extension product of the primer. The probing of a target sequence is thereby converted into a unimolecular event, which has substantial benefits in terms of kinetics, thermodynamics, assay design, and probe reliability.

The fluorescence probing technology has several advantages over the existing methods. Firstly, it is simple to use and does not require the design and synthesis of dual-labeled probes. Secondly, it gives highly specific information about the target sequence and avoids non-specific binding of probes. Thirdly, it has a lower cost due to the minimal use of probes. Finally, it is well-suited for high-throughput and automated applications.

The development of this technology is a significant breakthrough in molecular diagnostics, especially for high-throughput and automated applications. It provides a simple, reliable, and cost-effective method for detecting PCR products using fluorescence signaling, without the need for complex probe design and synthesis. The technology has potential applications in various fields such as clinical diagnostics, research, and forensic analysis.

In conclusion, the fluorescence probing technology has opened new avenues for the development of PCR-based assays for molecular diagnostics. It has the potential to revolutionize the field of molecular diagnostics by providing a simpler, more reliable, and cost-effective method for detecting PCR products. As the technology continues to evolve, we can expect to see further advancements in the field of molecular diagnostics that will enhance patient care and disease management.